Strand-specific RNA-seq of Salpingoeca rosetta rep3: pool whole - SRA

SRX6694020: Strand-specific RNA-seq of Salpingoeca rosetta rep3: pool whole
1 ILLUMINA (Illumina HiSeq 4000) run: 32.4M spots, 6.5G bases, 2.2Gb downloads

Design: Both genomic DNA and total RNA were extracted from the whole pool of a colony. The strand-specific RNA-seq library was prepared using the TruSeq Stranded mRNA LT Sample Prep (RS-122-2101, Illumina) and sequenced on the Illumina HiSeq 4000 platform according to the manufacturer's instructions. The DNA library was prepared using the MGIEasy DNA Library Prep Kit (V1.1, MGI Tech) and sequenced on the BGISEQ-500RS platform according to the manufacturer's instructions.

Submitted by: Kunming Institute of Zoology, Chinese Academy of Sciences

Study: The origin and evolution of RNA editing in Metazoan

PRJNA557895 • SRP218026 • All experiments • All runs

show Abstracthide Abstract

We shed light on the origin and evolution of RNA editing in Metazoan by selected representative 22 species, 18 of which were sequenced by ourselves.

Sample:

SAMN12422006 • SRS5251259 • All experiments • All runs

Organism: Salpingoeca rosetta

Library:

Name: SrosWHANIpfeEAABRBAPEI-223

Instrument: Illumina HiSeq 4000

Strategy: RNA-Seq